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<P class=MsoNormal style="MARGIN: 0cm 0cm 0pt"><SPAN lang=EN-US><FONT
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<P class=MsoNormal style="MARGIN: 0cm 0cm 0pt"><SPAN lang=EN-US><FONT
face="Times New Roman" size=3>The following summarized the response to the
ˇ§protein name listˇ¨.</FONT></SPAN></P>
<P class=MsoNormal style="MARGIN: 0cm 0cm 0pt"><SPAN lang=EN-US><FONT
face="Times New Roman" size=3>Thanks.</FONT></SPAN></P>
<P class=MsoNormal style="MARGIN: 0cm 0cm 0pt"><SPAN lang=EN-US><FONT
size=3><FONT face="Times New Roman"> <?xml:namespace prefix = o ns =
"urn:schemas-microsoft-com:office:office" /><o:p></o:p></FONT></FONT></SPAN></P>
<P class=MsoNormal
style="MARGIN: 0cm 0cm 0pt 24pt; TEXT-INDENT: -24pt; mso-list: l0 level1 lfo1; tab-stops: list 24.0pt"><FONT
face="Times New Roman"><SPAN lang=EN-US><FONT size=3>1.</FONT><SPAN
style="FONT: 7pt 'Times New Roman'">
</SPAN></SPAN><SPAN lang=EN-US><FONT size=3>from Fredrik
Olsson</FONT></SPAN></FONT></P>
<P class=MsoNormal style="MARGIN: 0cm 0cm 0pt"><SPAN lang=EN-US><FONT
face="Times New Roman" size=3>The SwissProt protein knowledge base can form a
base for a list of<BR>protein names. <SPAN
style="mso-spacerun: yes"> </SPAN>It is available at:<BR></FONT><A
href="http://www.expasy.ch/sprot/sprot-top.html"><FONT face="Times New Roman"
size=3>http://www.expasy.ch/sprot/sprot-top.html</FONT></A></SPAN></P>
<P class=MsoNormal style="MARGIN: 0cm 0cm 0pt"><SPAN lang=EN-US><FONT
size=3><FONT face="Times New Roman"> <o:p></o:p></FONT></FONT></SPAN></P>
<P class=MsoNormal
style="MARGIN: 0cm 0cm 0pt 24pt; TEXT-INDENT: -24pt; mso-list: l0 level1 lfo1; tab-stops: list 24.0pt"><FONT
face="Times New Roman"><SPAN lang=EN-US><FONT size=3>2.</FONT><SPAN
style="FONT: 7pt 'Times New Roman'">
</SPAN></SPAN><SPAN lang=EN-US><FONT size=3>from Lee
Gillam</FONT></SPAN></FONT></P>
<P class=MsoNormal style="MARGIN: 0cm 0cm 0pt"><SPAN lang=EN-US><FONT
face="Times New Roman" size=3>Try: </FONT><A
href="http://www.genomicglossaries.com"><FONT face="Times New Roman"
size=3>www.genomicglossaries.com</FONT></A></SPAN></P>
<P class=MsoNormal style="MARGIN: 0cm 0cm 0pt"><SPAN lang=EN-US><FONT
size=3><FONT face="Times New Roman"> <o:p></o:p></FONT></FONT></SPAN></P>
<P class=MsoNormal style="MARGIN: 0cm 0cm 0pt"><SPAN lang=EN-US><FONT
face="Times New Roman" size=3>3.<SPAN
style="mso-tab-count: 1"> from </SPAN>George
Demetriou</FONT></SPAN></P>
<P class=MsoNormal style="MARGIN: 0cm 0cm 0pt"><SPAN lang=EN-US><FONT
face="Times New Roman" size=3>You can find lists of protein names in the
following sites:<BR>SCOP database: <BR></FONT><A
href="http://scop.mrc-lmb.cam.ac.uk/scop/"><FONT face="Times New Roman"
size=3>http://scop.mrc-lmb.cam.ac.uk/scop/</FONT></A><BR><BR><FONT
face="Times New Roman" size=3>CATH database:<BR></FONT><A
href="http://www.biochem.ucl.ac.uk/bsm/cath/index.html"><FONT
face="Times New Roman"
size=3>http://www.biochem.ucl.ac.uk/bsm/cath/index.html</FONT></A><BR><BR><FONT
face="Times New Roman" size=3>Protein Data Bank:<BR></FONT><A
href="ftp://ftp.rcsb.org/pub/pdb/"><FONT face="Times New Roman"
size=3>ftp://ftp.rcsb.org/pub/pdb/</FONT></A><FONT face="Times New Roman"
size=3> <BR><BR>Enzyme names from Expasy:<BR></FONT><A
href="ftp://www.expasy.ch/databases/enzyme"><FONT face="Times New Roman"
size=3>ftp://www.expasy.ch/databases/enzyme</FONT></A></SPAN></P>
<P class=MsoNormal style="MARGIN: 0cm 0cm 0pt"><SPAN lang=EN-US><FONT
size=3><FONT face="Times New Roman"> <o:p></o:p></FONT></FONT></SPAN></P>
<P class=MsoNormal
style="MARGIN: 0cm 0cm 0pt 24pt; TEXT-INDENT: -24pt; mso-list: l0 level1 lfo1; tab-stops: list 24.0pt"><FONT
face="Times New Roman"><SPAN lang=EN-US><SPAN
style="FONT: 7pt 'Times New Roman'"><FONT size=3>4.
</FONT> </SPAN></SPAN><SPAN lang=EN-US><FONT size=3>from Bushra
Zawaydeh</FONT></SPAN></FONT></P>
<P class=MsoNormal style="MARGIN: 0cm 0cm 0pt"><SPAN lang=EN-US><FONT
face="Times New Roman" size=3>you can see the UMLS. They have it.<BR></FONT><A
href="http://www.nlm.nih.gov/research/umls/"><FONT face="Times New Roman"
size=3>http://www.nlm.nih.gov/research/umls/</FONT></A></SPAN></P>
<P class=MsoNormal style="MARGIN: 0cm 0cm 0pt"><SPAN lang=EN-US><FONT
size=3><FONT face="Times New Roman"> <o:p></o:p></FONT></FONT></SPAN></P>
<P class=MsoNormal
style="MARGIN: 0cm 0cm 0pt 24pt; TEXT-INDENT: -24pt; mso-list: l0 level1 lfo1; tab-stops: list 24.0pt"><FONT
face="Times New Roman"><SPAN lang=EN-US><FONT size=3>5. from
Philip Resnik</FONT></SPAN></FONT></P>
<P class=MsoNormal style="MARGIN: 0cm 0cm 0pt"><SPAN lang=EN-US><FONT
face="Times New Roman" size=3>You might find GenBank useful (</FONT><A
href="http://www.ncbi.nlm.nih.gov/Genbank/"><FONT face="Times New Roman"
size=3>http://www.ncbi.nlm.nih.gov/Genbank/</FONT></A><FONT
face="Times New Roman" size=3>).<BR>In particular, there is a protein database
"compiled from a variety of<BR>sources, including SwissProt, PIR, PRF, PDB" (see
the information at<BR></FONT><A
href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=Protein"><FONT
face="Times New Roman"
size=3>http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=Protein</FONT></A><FONT
face="Times New Roman" size=3>).<BR>Also, the SWISS-PROT database can be
downloaded; see the "downloading"<BR>link at </FONT><A
href="http://www.expasy.ch/sprot/sprot-top.html"><FONT face="Times New Roman"
size=3>http://www.expasy.ch/sprot/sprot-top.html</FONT></A><FONT
face="Times New Roman" size=3>. Either of these<BR>should provide a source
from which a protein name list could be<BR>extracted.</FONT></SPAN></P>
<P class=MsoNormal style="MARGIN: 0cm 0cm 0pt"><SPAN lang=EN-US><FONT
face="Times New Roman" size=3></FONT></SPAN> </P>
<P class=MsoNormal style="MARGIN: 0cm 0cm 0pt"><SPAN lang=EN-US><FONT
face="Times New Roman" size=3></FONT></SPAN> </P>
<P class=MsoNormal style="MARGIN: 0cm 0cm 0pt"><SPAN lang=EN-US><FONT
face="Times New Roman" size=3>Hsin-Hsi Chen</FONT></SPAN></P>
<P class=MsoNormal style="MARGIN: 0cm 0cm 0pt"><SPAN lang=EN-US><FONT
face="Times New Roman" size=3>National Taiwan
University</FONT></SPAN></P></FONT></DIV></BODY></HTML>