mlu5 for multiple transcripts

[Elma Blom]

Dear Leonid,

your assumption is entirely correct, and the command works perfectly now.
Thanks for your swift response and explanation.

Best wishes, Elma

2016-10-10 21:23 GMT+02:00 Leonid Spektor <spektor at andrew.cmu.edu>:

> Elma,
>
>     I assume you had a question. If not I apologies for replying. If you
> did, then the reason all files are combined into one is because you are
> using a pipe '|'. Pipes combine all files into one output and MLU only sees
> that one input file. In vast majority of cases pipes should not be used at
> all. The correct command lines are:
> maxwd +t*CHI +g2 +c5 +d1 -t%mor +f *.cha
> mlu -t%mor *.mxwrd.cex
>
> Leonid.
>
>
> On 10-10-16 10:34, Elma Blom wrote:
>
> Hi,
>
> We are using the mlu5 command without %mor tier. This goes well if we run
> the following command for one child at a time:
>
> maxwd +t*CHI +g2 +c5 +d1 -t%mor *.cha | mlu -t%mor
>
> However, if we select the transcripts of multiple children, mlu is
> calculated over all transcripts combined and not for each child/transcript
> separately (so we end up with one output file). If I understand the manual
> correctly, having a batchfile does not really solve the issue because we
> would still need to specify all transcripts, which are hundreds.
>
> Best wishes, Elma
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