Output legal format for the remaining (no gems) part of transcript

[Amber Muhinyi]

Now it works - thanks!

Best wishes
Amber

On Wednesday, 21 February 2018 16:28:19 UTC, Leonid Spektor wrote:
>
> Amber,
>
> I am not sure why +n and +a option combination in GEM was disabled. I have 
> changed CLAN to allow GEM to work when both of those options specified. 
> Please get the new CLAN and it should work for you.
>
>
> Leonid.
>
> On Feb 21, 2018, at 09:41, Amber Muhinyi <ambal... at gmail.com <javascript:>> 
> wrote:
>
> Hi Leonid
>
> Adding +a leads to this error message: Error: options "+a" and "+n" can 
> not be used together.
>
> I need to include +n (I think), as these are lazy gems. 
>
> Is there a way around?
>
> Thanks
> Amber
>
> On Wednesday, 21 February 2018 14:27:06 UTC, Leonid Spektor wrote:
>>
>> Amber,
>>
>> To get everything except gems add +a option to GEM commands line.
>>
>>
>> Leonid.
>>
>> On Feb 21, 2018, at 07:29, Amber <ambal... at gmail.com> wrote:
>>
>> Hi there
>>
>> Is there something similar to the -s switch that can be used with GEM so 
>> that it will create files of the REMAINING parts of the transcripts, i.e., 
>> minus the gem parts? I know how to create new files for the gem parts of a 
>> given transcript (e.g., gem +t*PAR +t%mor +sSandwich +n +d1, using the 
>> example from the manual). But it would be useful to also have files for the 
>> leftover parts of the transcripts. Is this possible?
>>
>> Any advice would be appreciated, 
>>
>> Amber 
>>
>>
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