[Corpora-List] BMC Bioinformatics special issue on BioNLP Shared Task 2011

[Paul Thompson]

We are pleased to announce that selected papers from the BioNLP Shared Task 2011 have been published as a special issue in BMC Bioinformatics:

BMC Bioinformatics Volume 13 Supplement 11"Selected articles from the BioNLP Shared Task 2011"<http://www.biomedcentral.com/bmcbioinformatics/supplements/13/S11>
Edited by Jin-Dong Kim, Sampo Pyysalo, Claire Nédellec, Sophia Ananiadou and Jun'ichi Tsujii

Papers in the special issue
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The Genia Event and Protein Coreference tasks of the BioNLP Shared Task 2011<http://www.biomedcentral.com/1471-2105/13/S11/S1>
Jin-Dong Kim, Ngan Nguyen, Yue Wang, Jun'ichi Tsujii, Toshihisa Takagi, Akinori Yonezawa

Overview of the ID, EPI and REL tasks of BioNLP Shared Task 2011<http://www.biomedcentral.com/1471-2105/13/S11/S2>
Sampo Pyysalo, Tomoko Ohta, Rafal Rak, Dan Sullivan, Chunhong Mao, Chunxia Wang, Bruno Sobral, Jun'ichi Tsujii, Sophia Ananiadou

BioNLP Shared Task - The Bacteria Track<http://www.biomedcentral.com/1471-2105/13/S11/S3>
Robert Bossy, Julien Jourde, Alain-Pierre Manine, Philippe Veber, Erick Alphonse, Maarten van de Guchte, Philippe Bessières, Claire Nédellec

University of Turku in the BioNLP'11 Shared Task<http://www.biomedcentral.com/1471-2105/13/S11/S4>
Jari Björne, Filip Ginter, Tapio Salakoski

Biomedical event extraction from abstracts and full papers using search-based structured prediction<http://www.biomedcentral.com/1471-2105/13/S11/S5>
Andreas Vlachos, Mark Craven

Semantically linking molecular entities in literature through entity relationships<http://www.biomedcentral.com/1471-2105/13/S11/S6>
Sofie Van Landeghem, Jari Björne, Thomas Abeel, Bernard De Baets, Tapio Salakoski, Yves Van de Peer

Biological event composition<http://www.biomedcentral.com/1471-2105/13/S11/S7>
Halil Kilicoglu, Sabine Bergler

Event extraction of bacteria biotopes: a knowledge-intensive NLP-based approach<http://www.biomedcentral.com/1471-2105/13/S11/S8>
Zorana Ratkovic, Wiktoria Golik, Pierre Warnier

Combining joint models for biomedical event extraction<http://www.biomedcentral.com/1471-2105/13/S11/S9>
David McClosky, Sebastian Riedel, Mihai Surdeanu, Andrew McCallum, Christopher D Manning
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Paul Thompson
Research Associate
School of Computer Science
National Centre for Text Mining
Manchester Institute of Biotechnology
University of Manchester
131 Princess Street
Manchester
M1 7DN
UK
Tel: 0161 306 3091
http://personalpages.manchester.ac.uk/staff/Paul.Thompson/


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